The First Record of Fusarium incarnatum as Wilting Agent on Tomato Plants in Iraq
DOI:
https://doi.org/10.30526/38.4.3746Keywords:
Fusarium incarnatum, Iraqi isolate, Phylogenetic tree, Tomato Plant, Wilting agentAbstract
Fusarium wilt is one of the most significant diseases that affects tomato plants and is caused by the fungus Fusarium oxysporum, whether in fields or greenhouses. The current research aimed to identify the Fusarium incarnatum (Desm.) Sacc. agent that causes Fusarium wilt on tomato plants for the first time in Iraq by morphological and molecular methods, in addition to detecting the phylogenetic distance and similarity of the Iraqi isolates to other isolates globally. In January of 2023, the wilt signs were apparent on wilted tomato plants in Al-Mahmoudiya fields in Iraq. The isolate was confirmed and molecularly diagnosed according to the internal transcribed spacer (ITS) region. The sequences of ITS region for the isolate have been presented to the database in the NCBI Gen Bank for the first time, and it obtained their accession number (OQ439282.1). F.incarantum was isolated and purified and identified by using morphological and microscopic features, the morphological features of F.incarnatum isolate were observed on PDA media and under a microscope revealed that macroconidia have curved shapes, three to five septate, and basal cells with a foot shape. The pathogenicity of the fungus F.incarnatum showed the fungus's ability to cause wilting disease in healthy tomato plants at 90.33%, this demonstrates that the Fusarium isolate can create strains that can attack the host continually. Additionally, the phylogenetic tree revealed the genetic relationship between the Iraq isolate and other global isolates and it showed the Iraq isolate (OQ439282.1) is in the same clade as the Turkey isolate, India isolates, and China isolate with similarity 100%, and this clade shares 99.60% similarity with another clade, including Thailand, Taiwan, Nigeria, South Korea, Pakistan, Japan, Egypt, USA, and Tunisia isolates. As far as we are aware, this is the first morphological and molecular recording of F.incarantum on an Iraqi tomato plants
References
1. Dhaya R. Flawless identification of Fusarium oxysporum in tomato plant leaves by machine learning algorithm. J Innov Image Process. 2020;2(4):194–202. https://doi: 10.36548/jiip.2020.4.004
2. Fayyadh MA, Ridh AM, Mustafa SM. Evaluate effectivity of different isolate of Psudomonas fluorescence against Fusarium oxysporum and Rhizoctonia solani. Iraqi J Agric Sci. 2012;43(Special Issue 3):31–38. https://www.researchgate.net/publication/310463195.
3. Summerell BA. Resolving Fusarium: current status of the genus. Annu Rev Phytopathol. 2019;57:15.1–15.17.. https:// doi: 10.1146/annurev-phyto-082718-100204.
4. Akbar A, Hussain S, Uiah K, Fahim M, Ali G. Detection, virulence and genetic diversity of Fusarium species infecting tomato in Northern Pakistan. PLoS One. 2018.
https:// doi: 10.1371/journal.pone.0203613.
5. Ye Q, Wang R, Ruan M, Yao Z, Cheng Y, Wan H, et al. Genetic diversity and identification of wilt and root rot pathogens of tomato in China. Plant Dis. 2020; 104(6):1715–24.
https:// doi: 10.1094/PDIS-09-19-1873-RE.
6. Juber KS. Evaluating the virulence of some pathogenic isolates for three Fusarium species in date palm and their control. Iraqi J Agric Sci. 2012;43(2):7–17. https://iasj.rdd.edu.iq/journals/uploads/2025/06/21/8cd5766469bb95cf1d8d9a7598a6a963.
7. Kristensen R, Trop M, Kosiak B, Holst-Jensen A. Phylogeny and toxigenic potential is correlated in Fusarium species as revealed by partial translation elongation factor 1 alpha gene sequences. Mycol Res. 2005;109:173–86. https:// doi: 10.1017/S0953756204002114
8. Wang L, Ge SL, Zhao K, Shiwen H. First report of Fusarium incarnatum causing spikelet rot on rice in China. Plant Dis. 2021. https:// doi: 10.1094/PDIS-12-20-2660-PDN.
9. Mao Y, Zhao B, Cao Z, Shen J, Xu S, Wu J, et al. Risk assessment and molecular mechanism of Fusarium incarnatum resistance to phenamacril. Pest Manag Sci. 2022;78(8):3394–403. https://doi.org/10.1002/ps.6967
10. Al-Dulaimi SA, Al-Bahrani RM. Evaluation of crude phenolic extract of Alhagi graecorum Boiss plant against some dermatophytes isolated from patients at Al-Yarmouk Teaching Hospital. Iraqi J Biotechnol. 2022;21(2):381–602. https://jige.uobaghdad.edu.iq/index.php/IJB/article/view/494/371
11. Murugan L, Krishnan N, Venkataravanappa V, Saha S, Mishra A, Sharma BK, et al. Molecular characterization and race identification of Fusarium oxysporum f. sp. lycopersici infecting tomato in India. Biotech. 2020;10:486. https://doi.org/10.1007/s13205-020-02475-z
12. Nicholas LB, Essarioui A, Kinkel L, Kistler CH. Phylogeny of plant species and plant diversity influence carbon use phenotypes among Fusarium populations in the rhizosphere microbiome. Phytobiomes. 2017;7:150–7 .https://doi.org/10.1094/PBIOMES-06-17-0028-R
13. Divakara ST, Santosh M, Aiyaz M, Ramana MV, Hariprasad P, Chandra NS, et al. Molecular identification and characterization of Fusarium spp. associated with sorghum seeds. J Sci Food Agric. 2014;94:1132–9. https://doi. 10.1002/jsfa.6380
14. Ingha IM, Kakoty Y, Unni BG, Das J, Kalita MC. Identification and characterization of Fusarium sp. using ITS and RAPD causing Fusarium wilt of tomato isolated from Assam, North East India. J Genet Eng Biotechnol. 2016;14:99–105. https://doi.org/10.1016/j.jgeb.2016.07.001
15. Akbar A, Hussain S, Uiah K, Fahim M, Ali G. Detection, virulence and genetic diversity of Fusarium species infecting tomato in Northern Pakistan. PLoS One. 2018;13(9):e0203613. https:// doi: 10.1371/journal.pone.0203613
16. Ismail FK. Evaluation of antifungal plant extracts against activity of some growths of Fusarium. Iraqi J Agric Sci. 2010;41(2):165–72. https://doi.org/10.47372/uajnas.2022.n1.a02
17. . Fradi AJ. The effective concentration of the crude extract of Mentha picata and Eucalyptus against the growth of Fusarium oxysporum. Ibn Al-Haitham J Pure Appl Sci. 2022;35(4):1–8. https:// doi: 10.30526/35.4.2848
18. Saeed RI, Juber KS. Isolation and identification of fungus Rhizoctonia solani from zinnia seeds, test its pathogenicity, and control it by environmentally friendly products. Iraqi J Agric Sci. 2017;48(2):520. https:// doi: 10.36103/ijas.v48i2.419 _.
19. Leong SK, Latiffah Z, Baharuddin S. Molecular characterization of Fusarium oxysporum f. sp. cubense of banana. Am J Appl Sci. 2010;6:1301–7. https:// doi: 10.3844/ajassp.2009.1301.1307.
20. Kakakhan HS, Shekhany KAM. Molecular detection of Fusarium species infected corn in Kurdistan region-Iraq. Passer J. 2023;5(2):224–30. https:// doi: 10.24271/PSR.2023.375971.1190
21. Ingha IM, Kakoty Y, Unni BG, Das J, Kalita MC. Identification and characterization of Fusarium sp. using ITS and RAPD causing Fusarium wilt of tomato isolated from Assam, North East India. J Genet Eng Biotechnol. 2016;14:99–105. https:// doi: 10.1016/j.jgeb.2016.07.001.
22. Jasim SF, Abdulbaqi NJ, Al-Zubaidi LA, Jasim AD. Evaluation of atmospheric cold plasma technique activity on phenylpropanoids gene expression and essential oil contents and different traits of Ocimum basilicum L. Baghdad Sci J. 2022;19(5):966–75. https://doi.org/10.21123/bsj.2022.6161.
23. Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: Molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 2013;30(12):2725–9.https:// doi: 10.1093/molbev/mst197.
24. . Mathur RS. The fungi and plant diseases of Iraq. Baghdad (Iraq): Ministry of Agriculture; 1968. https://pinhm.uobaghdad.edu.iq/index.php/pinhm/issue/view/7
25. Kareem HJ, Al-Araji AM. Evaluation of Trichoderma harzianum biological control against Fusarium oxysporum f. sp. melongenae. Iraqi J Sci. 2017;58(4B):2051–60. https://doi.org/10.24996/ijs.2017.58.4B.7
26. Parkinson D. Biology of Conidial Fungi. Vol. 1. New York: Academic Press; 1981. https://api.pageplace.de/preview/DT0400.
27. González CS, Caicedo OY, Espinoza BG. Molecular characterization of Fusarium spp. associated vascular wilt in passion fruit (Passiflora ligularis JUSS). Agric Sci. 2022;39(2):33–46.
http:// doi: 10.22267/rcia.223902.180
28. Al-Adhami NSN, Al-Araji AM. Molecular characterization by PCR-ITS technique of Fusarium oxysporum isolated from tomato in Baghdad city. Tikrit J Pure Sci. 2019;24(3):31–43.
https:// doi: 10.25130/tjps.v24i3.366_.
29. Kumar R, Stecher G, Li M, Knyaz C, Tamura K. MEGA X: Molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 2018;35(6):1547–9.
https:// doi: 10.1093/molbev/msy096. .
30. Alzubaidy SNT, Mohammed AJ, Al-Ghuburi AHA. A comparison of two conventional methods for identification of dermatophyte fungi. Ibn Al-Haitham J Pure Appl Sci. 2018;31(2):21–30.. https:// doi: 10.30526/31.2.1958
31. Ye Q, Wang R, Ruan M, Yao Z, Cheng Y, Wan H, et al. Genetic diversity and identification of wilt and root rot pathogens of tomato in China. Plant Dis. 2020;104(6):1715–24.
https:// doi: 10.1094/PDIS-09-19-1873-RE.
Downloads
Published
Issue
Section
License
Copyright (c) 2025 Ibn AL-Haitham Journal For Pure and Applied Sciences

This work is licensed under a Creative Commons Attribution 4.0 International License.
licenseTerms